BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021E12SP1|AL427781
(772 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1428 135 2e-31
>3x_Contig1428
Length = 9146
Score = 135 bits (63), Expect = 2e-31
Identities = 71/77 (92%)
Strand = Plus / Minus
Query: 41 agacgcgaagtgcctagacttgtacwatcagcatattaaagggaatccaagacaagatat 100
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1792 agacgcgaagtgcctagacttgtacaatcagcatattaaagggaatccaagacaagatat 1733
Query: 101 tykttctcbsatwataa 117
| ||||| || ||||
Sbjct: 1732 tcgttctcggatcataa 1716
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.48 0.727 1.39
Gapped
Lambda K H
1.48 0.727 1.39
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3456
Number of Sequences: 1807
Number of extensions: 3456
Number of successful extensions: 118
Number of sequences better than 1.0e-20: 1
length of query: 772
length of database: 10,358,551
effective HSP length: 15
effective length of query: 757
effective length of database: 10,331,446
effective search space: 7820904622
effective search space used: 7820904622
T: 0
A: 40
X1: 5 (10.7 bits)
X2: 14 (29.9 bits)
S1: 11 (24.0 bits)
S2: 47 (100.9 bits)